Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c553 | DFO49_0988 | Not Available | Negative | 1077687 - 1078508 | 29030.2 |
| penicillin-binding protein 1a | DFO49_0989 | Not Available | Negative | 1078969 - 1081443 | 89748.2 |
| atp-binding cassette subfamily f protein uup | DFO49_0990 | Not Available | Positive | 1081770 - 1083692 | 70972.6 |
| regulator of sirc expression with transglutaminase-like and tpr domain | DFO49_0991 | Not Available | Negative | 1083708 - 1084556 | 32334.9 |
| putative peptidoglycan lipid ii flippase | DFO49_0992 | Not Available | Negative | 1084668 - 1086221 | 56265.9 |
| ssu ribosomal protein s20p | DFO49_0993 | Not Available | Positive | 1086596 - 1086862 | 9319.27 |
| hypothetical protein | DFO49_0994 | Not Available | Negative | 1087034 - 1087468 | 15964.7 |
| hypothetical protein | DFO49_0995 | Not Available | Negative | 1087677 - 1087847 | 5629.12 |
| pseudouridine synthase | DFO49_0996 | Not Available | Negative | 1088028 - 1088588 | 20896.3 |
| isocitrate dehydrogenase (nadp) | DFO49_0997 | Not Available | Positive | 1088825 - 1090081 | 45888.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


