Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase small subunit | DFO49_0978 | Not Available | Positive | 1064151 - 1065314 | 41460.8 |
| carbamoyl-phosphate synthase large subunit | DFO49_0979 | Not Available | Positive | 1065307 - 1068540 | 117385.0 |
| transcription elongation factor grea | DFO49_0980 | Not Available | Positive | 1068948 - 1069424 | 17094.2 |
| putative yhby family rna-binding protein | DFO49_0981 | Not Available | Negative | 1069579 - 1070037 | 16445.3 |
| 23s rrna um-2552 2'-o-methyltransferase | DFO49_0982 | Not Available | Positive | 1070114 - 1070761 | 23939.1 |
| membrane protease ftsh catalytic subunit | DFO49_0983 | Not Available | Positive | 1071140 - 1073020 | 69323.5 |
| dihydropteroate synthase | DFO49_0984 | Not Available | Positive | 1073279 - 1074127 | 30627.4 |
| phosphoglucosamine mutase | DFO49_0985 | Not Available | Positive | 1074268 - 1075602 | 47231.1 |
| two-component system phosphate regulon response regulator phob | DFO49_0986 | Not Available | Positive | 1075628 - 1076320 | 25856.6 |
| mono/diheme cytochrome c family protein | DFO49_0987 | Not Available | Negative | 1076389 - 1077690 | 46200.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


