Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative rnase toxin 15 of polymorphic toxin system | DFO49_0047 | Not Available | Positive | 46707 - 47648 | 33758.3 |
| hypothetical protein | DFO49_0048 | Not Available | Positive | 47645 - 48310 | 25033.6 |
| hypothetical protein | DFO49_0049 | Not Available | Negative | 48499 - 48723 | 8533.53 |
| uncharacterized protein duf4148 | DFO49_0050 | Not Available | Negative | 48839 - 49099 | 8551.0 |
| hypothetical protein | DFO49_0051 | Not Available | Negative | 49375 - 49659 | 10580.6 |
| hypothetical protein | DFO49_0052 | Not Available | Negative | 49818 - 50786 | 35355.6 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | DFO49_0053 | Not Available | Negative | 50836 - 51603 | 27457.3 |
| benzaldehyde dehydrogenase (nad+) | DFO49_0054 | Not Available | Negative | 51670 - 53139 | 51344.8 |
| regulatory fis family protein | DFO49_0055 | Not Available | Positive | 53433 - 55295 | 67802.7 |
| hypothetical protein | DFO49_0056 | Not Available | Negative | 55343 - 55624 | 10782.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


