Desulfovibrio sp.

Gram-negative

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Desulfovibrio

Description

Desulfovibrio sp. is a Gram-negative bacterium characterized by the presence of true flagella, which facilitate its motility. This microbe is primarily found in the rumen, an anaerobic environment conducive to its metabolic processes. Desulfovibrio sp. possesses a single replicon, indicating a streamlined genomic structure, which is represented in the genome accession PARK00000000.1. This genetic configuration may play a role in its adaptability to the specific conditions of its habitat. The presence of Desulfovibrio sp. in the rumen suggests its involvement in the complex microbial ecosystem that aids in the digestion of fibrous plant materials. This bacterium is likely to participate in sulfur metabolism, contributing to the biogeochemical cycling of sulfur compounds within the rumen. The unique combination of its Gram-negative cell wall structure and flagellar motility underscores its potential role in navigating the anaerobic conditions of its habitat, where it may interact with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusDesulfovibrio
SpeciesDesulfovibrio sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Desulfovibrio sp. isolate SP109 MHASMcontig_2604448, whole

Gene Summary

Adenine Count

832197 bp

Thymine Count

823659 bp

Guanine Count

906575 bp

Cytosine Count

920576 bp

Genome Length

3484875 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferaseCL942_09760Not AvailablePositive2079294 - 207977917595.4
hypothetical proteinCL942_09765Not AvailableNegative2079915 - 208064927912.5
hypothetical proteinCL942_09770Not AvailableNegative2080767 - 208111112822.6
glutamine synthetaseCL942_09775Not AvailableNegative2081322 - 208266550825.5
radical sam proteinCL942_09780Not AvailableNegative2082921 - 208385934606.4
universal stress protein uspaCL942_09785Not AvailableNegative2083930 - 208435214851.1
glycosyltransferase family 1 proteinCL942_09790Not AvailableNegative2084478 - 208559940729.2
hypothetical proteinCL942_09795Not AvailablePositive2085743 - 208675936382.7
lactate utilization proteinCL942_09800Not AvailablePositive2086825 - 208745423075.0
dna-binding proteinCL942_09805Not AvailableNegative2087548 - 208787412183.8

Displaying genes 1951 – 1960 of 3269 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0016958Desferrioxamine EC27H48N6O9Chemical structure of Desferrioxamine ENULL
Average600.714Da
Monoisotopic600.34827715Da
BASm0016967Desferrioxamine GC27H50N6O10Chemical structure of Desferrioxamine GNULL
Average618.729Da
Monoisotopic618.358841834Da
BASm0040648Streptomyces aculeolatusNot availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.