Halodesulfovibrio aestuarii

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Halodesulfovibrio

Description

Halodesulfovibrio aestuarii is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism and typically exists as single cells. This microbe thrives optimally at a temperature of 32.0°C, indicating a preference for mesophilic conditions. Its ability to adapt to various habitats suggests a versatile ecological role, allowing it to inhabit environments where oxygen availability fluctuates. The facultative anaerobic nature of Halodesulfovibrio aestuarii enables it to utilize both aerobic and anaerobic metabolic processes, which may contribute to its survival in diverse ecological niches. This adaptability might allow the organism to participate in various biogeochemical cycles, particularly in environments where organic matter is abundant and oxygen levels are variable. Given its unique physiological traits, Halodesulfovibrio aestuarii could play a significant role in the degradation of organic compounds in sedimentary environments, where it may interact with other microbial communities. Such interactions could facilitate nutrient cycling and contribute to ecosystem functions, highlighting the importance of this organism in its native habitats.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusHalodesulfovibrio
SpeciesHalodesulfovibrio aestuarii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Halodesulfovibrio aestuarii
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature32
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Halodesulfovibrio aestuarii strain DSM 17919 genome assembly,

Gene Summary

Adenine Count

966369 bp

Thymine Count

978930 bp

Guanine Count

809297 bp

Cytosine Count

789658 bp

Genome Length

3544809 bp

Protein-coding Genes

2977 genes

Non-Coding Genes

227 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionyl-trna formyltransferaseSAMN05660830_03035Not AvailableNegative3362536 - 336352535421.1
peptide deformylaseSAMN05660830_03036Not AvailableNegative3363510 - 336401018547.7
tetratricopeptide repeat-containing proteinSAMN05660830_03037Not AvailableNegative3364379 - 336516430254.2
dna gyrase subunit aSAMN05660830_03038Not AvailableNegative3365168 - 336760691016.1
dna gyrase subunit bSAMN05660830_03039Not AvailableNegative3367616 - 337001289776.9
dna polymerase iii, beta subunitSAMN05660830_03040Not AvailableNegative3370012 - 337116643694.9
chromosomal replication initiator proteinSAMN05660830_03041Not AvailableNegative3371302 - 337263650426.1
23s rrna pseudouridine955/2504/2580 synthaseSAMN05660830_03042Not AvailablePositive3373280 - 337420034531.6
dna repair exonuclease sbccd nuclease subunitSAMN05660830_03043Not AvailablePositive3374225 - 337548746544.2
uncharacterized protein yhanSAMN05660830_03044Not AvailablePositive3375487 - 3378567113816.0

Displaying genes 3081 – 3090 of 6480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC10370862
AppendicitisCausesPMC10370862
Abdominal abscessesCausesPMC10370862
Septic arthritisCausesPMC10370862
Blood infectionCausesPMC12131628

Displaying health effects 1 – 5 of 5 in total