Halodesulfovibrio aestuarii

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Halodesulfovibrio

Description

Halodesulfovibrio aestuarii is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism and typically exists as single cells. This microbe thrives optimally at a temperature of 32.0°C, indicating a preference for mesophilic conditions. Its ability to adapt to various habitats suggests a versatile ecological role, allowing it to inhabit environments where oxygen availability fluctuates. The facultative anaerobic nature of Halodesulfovibrio aestuarii enables it to utilize both aerobic and anaerobic metabolic processes, which may contribute to its survival in diverse ecological niches. This adaptability might allow the organism to participate in various biogeochemical cycles, particularly in environments where organic matter is abundant and oxygen levels are variable. Given its unique physiological traits, Halodesulfovibrio aestuarii could play a significant role in the degradation of organic compounds in sedimentary environments, where it may interact with other microbial communities. Such interactions could facilitate nutrient cycling and contribute to ecosystem functions, highlighting the importance of this organism in its native habitats.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusHalodesulfovibrio
SpeciesHalodesulfovibrio aestuarii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Halodesulfovibrio aestuarii
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature32
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Halodesulfovibrio aestuarii strain DSM 17919 genome assembly,

Gene Summary

Adenine Count

966369 bp

Thymine Count

978930 bp

Guanine Count

809297 bp

Cytosine Count

789658 bp

Genome Length

3544809 bp

Protein-coding Genes

2977 genes

Non-Coding Genes

227 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase (ggdef) domain-containing proteinSAMN05660830_02479Not AvailablePositive2737389 - 273901161460.7
formate-dependent phosphoribosylglycinamide formyltransferaseSAMN05660830_02480Not AvailablePositive2739235 - 274041642228.6
nucleotide-binding universal stress protein, uspa familySAMN05660830_02481Not AvailableNegative2740526 - 274102618667.5
hypothetical proteinSAMN05660830_02482Not AvailableNegative2741023 - 274201238317.1
uncharacterized conserved protein, duf1499 familySAMN05660830_02483Not AvailableNegative2742049 - 274249816958.1
amino acid abc transporter membrane protein 1, paat family /amino acid abc transporter membrane protein 2, paat familySAMN05660830_02484Not AvailableNegative2742725 - 274450966543.1
amino acid abc transporter substrate-binding protein, paat familySAMN05660830_02485Not AvailableNegative2744631 - 274545530441.7
amino acid abc transporter atp-binding protein, paat familySAMN05660830_02486Not AvailableNegative2745549 - 274628027387.4
hypothetical proteinSAMN05660830_02487Not AvailablePositive2746682 - 274743426820.4
transcriptional regulator, tetr familySAMN05660830_02488Not AvailableNegative2747491 - 274811123457.2

Displaying genes 2531 – 2540 of 6480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC10370862
AppendicitisCausesPMC10370862
Abdominal abscessesCausesPMC10370862
Septic arthritisCausesPMC10370862
Blood infectionCausesPMC12131628

Displaying health effects 1 – 5 of 5 in total