Halodesulfovibrio aestuarii

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Halodesulfovibrio

Description

Halodesulfovibrio aestuarii is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism and typically exists as single cells. This microbe thrives optimally at a temperature of 32.0°C, indicating a preference for mesophilic conditions. Its ability to adapt to various habitats suggests a versatile ecological role, allowing it to inhabit environments where oxygen availability fluctuates. The facultative anaerobic nature of Halodesulfovibrio aestuarii enables it to utilize both aerobic and anaerobic metabolic processes, which may contribute to its survival in diverse ecological niches. This adaptability might allow the organism to participate in various biogeochemical cycles, particularly in environments where organic matter is abundant and oxygen levels are variable. Given its unique physiological traits, Halodesulfovibrio aestuarii could play a significant role in the degradation of organic compounds in sedimentary environments, where it may interact with other microbial communities. Such interactions could facilitate nutrient cycling and contribute to ecosystem functions, highlighting the importance of this organism in its native habitats.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusHalodesulfovibrio
SpeciesHalodesulfovibrio aestuarii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Halodesulfovibrio aestuarii
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature32
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Halodesulfovibrio aestuarii strain DSM 17919 genome assembly,

Gene Summary

Adenine Count

966369 bp

Thymine Count

978930 bp

Guanine Count

809297 bp

Cytosine Count

789658 bp

Genome Length

3544809 bp

Protein-coding Genes

2977 genes

Non-Coding Genes

227 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crea proteinSAMN05660830_00019Not AvailablePositive15387 - 1586317028.7
dna polymerase-3 subunit epsilonSAMN05660830_00020Not AvailablePositive15865 - 1640419790.7
23s rrna um-2552 2'-o-methyltransferaseSAMN05660830_00021Not AvailablePositive16621 - 1723223111.7
dna-binding regulatory protein, yebc/pmpr familySAMN05660830_00022Not AvailablePositive17347 - 1809627214.3
holliday junction endonuclease ruvcSAMN05660830_00023Not AvailablePositive18426 - 1891717272.2
holliday junction dna helicase subunit ruvaSAMN05660830_00024Not AvailablePositive19244 - 1984621750.2
holliday junction dna helicase subunit ruvbSAMN05660830_00025Not AvailablePositive19849 - 2081735516.9
thymidylate synthase (fad)SAMN05660830_00026Not AvailablePositive20852 - 2157427107.7
dnaa family proteinSAMN05660830_00027Not AvailablePositive22079 - 2350653284.1
transcriptional regulator, xre family with cupin sensorSAMN05660830_00028Not AvailablePositive23747 - 2430420990.9

Displaying genes 211 – 220 of 6480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC10370862
AppendicitisCausesPMC10370862
Abdominal abscessesCausesPMC10370862
Septic arthritisCausesPMC10370862
Blood infectionCausesPMC12131628

Displaying health effects 1 – 5 of 5 in total