Fusobacterium ulcerans

Gram-negativeAnaerobe

Kingdom

Fusobacteriati

Phylum

Fusobacteriota

Class

Fusobacteriia

Order

Fusobacteriales

Family

Fusobacteriaceae

Genus

Fusobacterium

Description

Fusobacterium ulcerans is a Gram-negative anaerobic bacterium characterized by the presence of true flagella, which facilitates its motility in anaerobic environments. This microbe has been identified in the habitat of rumen fluid, indicating its association with the digestive systems of ruminant animals. The genome of Fusobacterium ulcerans is represented by a single replicon, and its genetic information is cataloged under the accession number NZ_CP028105.1. The anaerobic lifestyle of Fusobacterium ulcerans suggests a specialized adaptation to low-oxygen environments, such as those found in the rumen, where it likely plays a role in the complex microbial ecosystem involved in the fermentation processes of its host. Understanding the traits of this organism may provide insights into its ecological function and potential interactions within the rumen microbiome, highlighting its importance in the digestive health of ruminants.

Taxonomy

KingdomFusobacteriati
PhylumFusobacteriota
ClassFusobacteriia
OrderFusobacteriales
FamilyFusobacteriaceae
GenusFusobacterium
SpeciesFusobacterium ulcerans
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen fluid
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fusobacterium ulcerans strain ATCC 49185 chromosome, complete

Gene Summary

Adenine Count

1218480 bp

Thymine Count

1238537 bp

Guanine Count

535309 bp

Cytosine Count

545349 bp

Genome Length

3537675 bp

Protein-coding Genes

3138 genes

Non-Coding Genes

178 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-phosphoshikimate 1-carboxyvinyltransferaseC4N20_RS04695Not AvailableNegative1041670 - 104294147148.9
3-deoxy-7-phosphoheptulonate synthaseC4N20_RS04700Not AvailableNegative1042969 - 104398837181.2
chorismate synthaseC4N20_RS04705Not AvailableNegative1044075 - 104518440684.9
3-dehydroquinate synthaseC4N20_RS04710Not AvailableNegative1045195 - 104619637968.4
chorismate mutaseC4N20_RS04715Not AvailablePositive1046576 - 104764640461.5
ycxb family proteinC4N20_RS04720Not AvailablePositive1047819 - 104831919653.7
s-methyl-5-thioribose kinaseC4N20_RS04725Not AvailableNegative1048406 - 104959346023.4
s-methyl-5-thioribose-1-phosphate isomeraseC4N20_RS04730Not AvailableNegative1049609 - 105065839422.2
na+/h+ antiporter nhac family proteinC4N20_RS04735Not AvailableNegative1050685 - 105198045170.0
l-fuculose-phosphate aldolaseC4N20_RS04740Not AvailableNegative1052024 - 105268924766.9

Displaying genes 1021 – 1030 of 3316 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

266 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 266 metabolites

Health Effects

No health effects information available for this bacterium.