Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| queuine trna-ribosyltransferase | SAMN04488494_0411 | Not Available | Positive | 75361 - 76503 | 43098.8 |
| lipopolysaccharide export system permease protein | SAMN04488494_0412 | Not Available | Positive | 76500 - 77681 | 44813.1 |
| superfamily ii dna and rna helicase | SAMN04488494_0413 | Not Available | Positive | 77681 - 79039 | 50548.6 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN04488494_0414 | Not Available | Positive | 79060 - 79893 | 30828.1 |
| udp-glucose 4-epimerase | SAMN04488494_0415 | Not Available | Positive | 79905 - 80945 | 38466.3 |
| nitt/taut family transport system substrate-binding protein | SAMN04488494_0416 | Not Available | Positive | 81737 - 82681 | 35666.4 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN04488494_0417 | Not Available | Positive | 82678 - 84726 | 77596.0 |
| putative mfs transporter, agza family, xanthine/uracil permease | SAMN04488494_0418 | Not Available | Negative | 85304 - 86581 | 45896.8 |
| signal transduction histidine kinase | SAMN04488494_0419 | Not Available | Negative | 86578 - 87633 | 38994.4 |
| hypothetical protein | SAMN04488494_0420 | Not Available | Negative | 87754 - 88179 | 16145.3 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
