Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN04488494_0704 | Not Available | Negative | 359434 - 360153 | 27269.0 |
| mfs transporter, nhs family, nucleoside permease | SAMN04488494_0705 | Not Available | Negative | 360176 - 361486 | 48079.6 |
| protein of unknown function | SAMN04488494_0706 | Not Available | Negative | 361510 - 362439 | 35143.0 |
| signal peptidase ii | SAMN04488494_0707 | Not Available | Negative | 362429 - 363076 | 24481.3 |
| rna polymerase-binding transcription factor dksa | SAMN04488494_0708 | Not Available | Negative | 363073 - 363453 | 14507.3 |
| isoleucyl-trna synthetase | SAMN04488494_0709 | Not Available | Negative | 363483 - 367040 | 135319.0 |
| anaerobic c4-dicarboxylate transporter dcub | SAMN04488494_0710 | Not Available | Positive | 367245 - 368693 | 51445.4 |
| phosphoglucomutase | SAMN04488494_0711 | Not Available | Negative | 368753 - 370498 | 64793.6 |
| hypothetical protein | SAMN04488494_0712 | Not Available | Negative | 370625 - 371809 | 46183.9 |
| hypothetical protein | SAMN04488494_0713 | Not Available | Positive | 371937 - 372440 | 18921.9 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
