Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl prolyl cis-trans isomerase /apo-metallochaperone slyd | SAMN04488494_0234 | Not Available | Positive | 3568053 - 3568643 | 21507.8 |
| chorismate synthase | SAMN04488494_0235 | Not Available | Positive | 3568669 - 3569754 | 39106.4 |
| dihydroorotate dehydrogenase (nad+) catalytic subunit | SAMN04488494_0236 | Not Available | Negative | 3569951 - 3570856 | 31877.8 |
| dihydroorotate dehydrogenase electron transfer subunit | SAMN04488494_0237 | Not Available | Negative | 3570844 - 3571617 | 28269.7 |
| helix-turn-helix | SAMN04488494_0238 | Not Available | Negative | 3571675 - 3572163 | 18715.1 |
| dna polymerase iii, delta subunit | SAMN04488494_0239 | Not Available | Negative | 3572939 - 3573967 | 39155.3 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN04488494_0240 | Not Available | Positive | 3574016 - 3574465 | 17658.6 |
| hypothetical protein | SAMN04488494_0241 | Not Available | Negative | 3574475 - 3575332 | 32736.1 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN04488494_0242 | Not Available | Negative | 3575347 - 3576192 | 30991.7 |
| Trna-his | Not Available | Not Available | Positive | 3576287 - 3576365 | Not Available |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
