Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase, trmh family | SAMN04488494_0360 | Not Available | Negative | 15359 - 16126 | 28322.1 |
| outer membrane protein assembly factor bama | SAMN04488494_0361 | Not Available | Positive | 16233 - 18422 | 83180.9 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN04488494_0362 | Not Available | Positive | 18519 - 19325 | 29753.6 |
| protein of unknown function | SAMN04488494_0363 | Not Available | Positive | 19345 - 19848 | 19511.0 |
| ssra-binding protein | SAMN04488494_0364 | Not Available | Positive | 19858 - 20340 | 18550.6 |
| methionine synthase (b12-dependent) | SAMN04488494_0365 | Not Available | Positive | 20375 - 23083 | 99005.4 |
| glycosyl hydrolase-like 10 | SAMN04488494_0366 | Not Available | Positive | 23094 - 24557 | 56716.8 |
| hypothetical protein | SAMN04488494_0367 | Not Available | Positive | 24563 - 25198 | 23904.3 |
| hypothetical protein | SAMN04488494_0368 | Not Available | Negative | 25195 - 25635 | 16915.9 |
| positive regulator of sigma(e), rsec/mucc | SAMN04488494_0369 | Not Available | Positive | 25790 - 26203 | 14751.2 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
