Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily f, member 3 | SAMN04488494_0183 | Not Available | Positive | 3506599 - 3508587 | 75100.0 |
| putative endopeptidase | SAMN04488494_0184 | Not Available | Positive | 3508601 - 3510634 | 76739.3 |
| double zinc ribbon | SAMN04488494_0185 | Not Available | Positive | 3510753 - 3511676 | 34560.4 |
| serine/threonine protein kinase | SAMN04488494_0186 | Not Available | Positive | 3511676 - 3515092 | 129675.0 |
| aaa+-type atpase, spovk/ycf46/vps4 family | SAMN04488494_0187 | Not Available | Positive | 3515099 - 3518404 | 124306.0 |
| forkhead associated (fha) domain, binds pser, pthr, ptyr | SAMN04488494_0188 | Not Available | Positive | 3518411 - 3519169 | 26191.6 |
| protein phosphatase | SAMN04488494_0189 | Not Available | Positive | 3519185 - 3519928 | 26792.3 |
| homoserine o-succinyltransferase | SAMN04488494_0190 | Not Available | Positive | 3519950 - 3520867 | 35781.0 |
| putative protease | SAMN04488494_0191 | Not Available | Positive | 3520873 - 3522657 | 66684.2 |
| hypothetical protein | SAMN04488494_0192 | Not Available | Positive | 3522641 - 3523573 | 35438.1 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
