Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN04488494_0019 | Not Available | Negative | 3337037 - 3337729 | 26180.1 |
| 3-isopropylmalate dehydrogenase | SAMN04488494_0020 | Not Available | Negative | 3337722 - 3338783 | 38883.6 |
| d-citramalate synthase | SAMN04488494_0021 | Not Available | Negative | 3338818 - 3340392 | 58490.9 |
| 3-isopropylmalate dehydratase, small subunit | SAMN04488494_0022 | Not Available | Negative | 3340371 - 3340967 | 22365.3 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN04488494_0023 | Not Available | Negative | 3341053 - 3342447 | 50237.2 |
| 2-isopropylmalate synthase | SAMN04488494_0024 | Not Available | Negative | 3342450 - 3343952 | 54782.4 |
| lysozyme | SAMN04488494_0025 | Not Available | Positive | 3344382 - 3345698 | 49901.6 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN04488494_0026 | Not Available | Positive | 3345729 - 3346199 | 18015.8 |
| hypothetical protein | SAMN04488494_0027 | Not Available | Negative | 3346200 - 3347081 | 32502.0 |
| hypothetical protein | SAMN04488494_0028 | Not Available | Negative | 3347179 - 3347949 | 28771.8 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
