Xylanibacter ruminicola

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Xylanibacter

Description

Xylanibacter ruminicola is a Gram-negative, rod-shaped bacterium that is nonsporulating and classified as an anaerobe. This microbe is primarily associated with host environments, suggesting its role in specific biological systems where it may contribute to various metabolic processes. Xylanibacter ruminicola thrives in anaerobic conditions, which is indicative of its adaptation to environments such as the gastrointestinal tracts of ruminants. While its precise interactions within the host ecosystem remain to be fully elucidated, the bacterium likely plays a significant role in the fermentation of plant polysaccharides, particularly xylans, contributing to the overall digestive efficiency of the host. The nonsporulating nature of Xylanibacter ruminicola suggests that it relies on stable, conducive environments for survival and reproduction, further emphasizing its specialization within host-associated habitats. Understanding the metabolic capabilities and ecological interactions of Xylanibacter ruminicola may provide insights into its potential utility in enhancing the digestive processes of ruminants, thereby influencing agricultural practices related to livestock management and feed efficiency. This highlights the importance of anaerobic microorganisms in the maintenance of host health and nutrient cycling within their ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusXylanibacter
SpeciesXylanibacter ruminicola
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prevotella ruminicola strain BPI-34 genome assembly, contig:

Gene Summary

Adenine Count

957861 bp

Thymine Count

956378 bp

Guanine Count

868579 bp

Cytosine Count

875474 bp

Genome Length

3658292 bp

Protein-coding Genes

3072 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative negative regulator of rcsb-dependent stress responseSAMN04488494_2279Not AvailableNegative2192634 - 219331724573.9
hypothetical proteinSAMN04488494_2280Not AvailableNegative2193274 - 21933784108.81
dna replication and repair protein recfSAMN04488494_2281Not AvailablePositive2193459 - 219455942144.7
protein of unknown functionSAMN04488494_2282Not AvailablePositive2194552 - 219484211189.7
5-formyltetrahydrofolate cyclo-ligaseSAMN04488494_2283Not AvailableNegative2194835 - 219538020617.1
carboxyl-terminal processing proteaseSAMN04488494_2284Not AvailableNegative2195373 - 219707363758.5
dcmp deaminaseSAMN04488494_2285Not AvailableNegative2197077 - 219751416266.5
peptidyl-dipeptidase dcpSAMN04488494_2286Not AvailableNegative2197486 - 219960081812.4
camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinasesSAMN04488494_2287Not AvailableNegative2199733 - 220041026421.0
thiamine biosynthesis lipoproteinSAMN04488494_2288Not AvailableNegative2200417 - 220144237839.6

Displaying genes 1911 – 1920 of 3125 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.