Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside 2-deoxyribosyltransferase like | SAMN04488494_2125 | Not Available | Negative | 2029630 - 2030334 | 26820.7 |
| sugar or nucleoside kinase, ribokinase family | SAMN04488494_2126 | Not Available | Negative | 2030341 - 2031987 | 61538.0 |
| hypothetical protein | SAMN04488494_2127 | Not Available | Positive | 2032124 - 2032732 | 22973.3 |
| predicted nad-dependent protein-adp-ribosyltransferase ybia, duf1768 family | SAMN04488494_2128 | Not Available | Positive | 2032741 - 2033358 | 23901.7 |
| adp-ribosylglycohydrolase | SAMN04488494_2129 | Not Available | Positive | 2033452 - 2035821 | 87891.2 |
| hypothetical protein | SAMN04488494_2130 | Not Available | Negative | 2035824 - 2037242 | 55031.6 |
| pd-(d/e)xk nuclease superfamily protein | SAMN04488494_2131 | Not Available | Positive | 2037383 - 2040085 | 103724.0 |
| atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains) | SAMN04488494_2132 | Not Available | Positive | 2040099 - 2043290 | 122161.0 |
| atpase family associated with various cellular activities (aaa) | SAMN04488494_2133 | Not Available | Positive | 2043413 - 2045227 | 70156.4 |
| hypothetical protein | SAMN04488494_2134 | Not Available | Positive | 2045279 - 2046007 | 28251.8 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
