Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04488494_2014 | Not Available | Positive | 1912480 - 1913208 | 27366.5 |
| hypothetical protein | SAMN04488494_2015 | Not Available | Negative | 1913232 - 1913924 | 25741.8 |
| transcriptional regulator, lyttr family | SAMN04488494_2016 | Not Available | Positive | 1914065 - 1914892 | 31485.5 |
| tonb dependent receptor | SAMN04488494_2017 | Not Available | Positive | 1914978 - 1917056 | 77096.4 |
| hypothetical protein | SAMN04488494_2018 | Not Available | Positive | 1917037 - 1917528 | 18117.1 |
| hypothetical protein | SAMN04488494_2019 | Not Available | Negative | 1917549 - 1918304 | 26668.0 |
| transcription elongation factor grea | SAMN04488494_2020 | Not Available | Negative | 1918319 - 1918786 | 17259.0 |
| formyltetrahydrofolate deformylase | SAMN04488494_2021 | Not Available | Positive | 1918975 - 1919838 | 33570.8 |
| glutamine amidotransferase | SAMN04488494_2022 | Not Available | Positive | 1919835 - 1920425 | 22295.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN04488494_2023 | Not Available | Positive | 1920422 - 1921141 | 26263.8 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
