Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type sugar transport system, substrate-binding protein, contains n-terminal xre family hth domain | SAMN04488494_1943 | Not Available | Negative | 1828900 - 1831041 | 80766.6 |
| beta-fructofuranosidase | SAMN04488494_1944 | Not Available | Negative | 1831149 - 1832756 | 60328.0 |
| protein of unknown function | SAMN04488494_1945 | Not Available | Negative | 1832769 - 1834157 | 49973.4 |
| starch-binding associating with outer membrane | SAMN04488494_1946 | Not Available | Negative | 1834197 - 1835942 | 65651.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488494_1947 | Not Available | Negative | 1835985 - 1839095 | 115273.0 |
| abc-type sugar transport system, substrate-binding protein, contains n-terminal xre family hth domain | SAMN04488494_1948 | Not Available | Positive | 1839340 - 1840875 | 56817.9 |
| uracil phosphoribosyltransferase | SAMN04488494_1949 | Not Available | Positive | 1840950 - 1841609 | 24204.5 |
| solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 | SAMN04488494_1950 | Not Available | Negative | 1841730 - 1843235 | 54222.7 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | SAMN04488494_1951 | Not Available | Negative | 1843434 - 1844438 | 36626.5 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit alpha | SAMN04488494_1952 | Not Available | Negative | 1844520 - 1846364 | 66245.5 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
