Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted o-methyltransferase yrrm | SAMN04488494_1923 | Not Available | Negative | 1801893 - 1802525 | 24148.0 |
| 3-dehydroquinate dehydratase | SAMN04488494_1924 | Not Available | Negative | 1802522 - 1802938 | 15408.6 |
| integrase/recombinase xerd | SAMN04488494_1925 | Not Available | Positive | 1803030 - 1803941 | 35085.3 |
| glutamate racemase | SAMN04488494_1926 | Not Available | Negative | 1803928 - 1804761 | 30887.3 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04488494_1927 | Not Available | Negative | 1804748 - 1805263 | 19394.2 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04488494_1928 | Not Available | Negative | 1805295 - 1805798 | 18857.7 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04488494_1929 | Not Available | Negative | 1805846 - 1806361 | 19348.4 |
| beta-barrel assembly machine subunit bama | SAMN04488494_1930 | Not Available | Negative | 1806373 - 1809075 | 102255.0 |
| undecaprenyl diphosphate synthase | SAMN04488494_1931 | Not Available | Negative | 1809108 - 1809851 | 28583.1 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488494_1932 | Not Available | Negative | 1809857 - 1810513 | 24062.9 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
