Xylanibacter ruminicola

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Xylanibacter

Description

Xylanibacter ruminicola is a Gram-negative, rod-shaped bacterium that is nonsporulating and classified as an anaerobe. This microbe is primarily associated with host environments, suggesting its role in specific biological systems where it may contribute to various metabolic processes. Xylanibacter ruminicola thrives in anaerobic conditions, which is indicative of its adaptation to environments such as the gastrointestinal tracts of ruminants. While its precise interactions within the host ecosystem remain to be fully elucidated, the bacterium likely plays a significant role in the fermentation of plant polysaccharides, particularly xylans, contributing to the overall digestive efficiency of the host. The nonsporulating nature of Xylanibacter ruminicola suggests that it relies on stable, conducive environments for survival and reproduction, further emphasizing its specialization within host-associated habitats. Understanding the metabolic capabilities and ecological interactions of Xylanibacter ruminicola may provide insights into its potential utility in enhancing the digestive processes of ruminants, thereby influencing agricultural practices related to livestock management and feed efficiency. This highlights the importance of anaerobic microorganisms in the maintenance of host health and nutrient cycling within their ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusXylanibacter
SpeciesXylanibacter ruminicola
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prevotella ruminicola strain BPI-34 genome assembly, contig:

Gene Summary

Adenine Count

957861 bp

Thymine Count

956378 bp

Guanine Count

868579 bp

Cytosine Count

875474 bp

Genome Length

3658292 bp

Protein-coding Genes

3072 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted o-methyltransferase yrrmSAMN04488494_1923Not AvailableNegative1801893 - 180252524148.0
3-dehydroquinate dehydrataseSAMN04488494_1924Not AvailableNegative1802522 - 180293815408.6
integrase/recombinase xerdSAMN04488494_1925Not AvailablePositive1803030 - 180394135085.3
glutamate racemaseSAMN04488494_1926Not AvailableNegative1803928 - 180476130887.3
periplasmic chaperone for outer membrane proteins skpSAMN04488494_1927Not AvailableNegative1804748 - 180526319394.2
periplasmic chaperone for outer membrane proteins skpSAMN04488494_1928Not AvailableNegative1805295 - 180579818857.7
periplasmic chaperone for outer membrane proteins skpSAMN04488494_1929Not AvailableNegative1805846 - 180636119348.4
beta-barrel assembly machine subunit bamaSAMN04488494_1930Not AvailableNegative1806373 - 1809075102255.0
undecaprenyl diphosphate synthaseSAMN04488494_1931Not AvailableNegative1809108 - 180985128583.1
outer membrane protein beta-barrel domain-containing proteinSAMN04488494_1932Not AvailableNegative1809857 - 181051324062.9

Displaying genes 1561 – 1570 of 3125 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.