Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488494_1903 | Not Available | Positive | 1778422 - 1779267 | 32281.1 |
| cystathione beta-lyase | SAMN04488494_1904 | Not Available | Positive | 1779264 - 1780469 | 45569.4 |
| hypothetical protein | SAMN04488494_1905 | Not Available | Negative | 1780488 - 1782506 | 74155.3 |
| beta-xylosidase | SAMN04488494_1906 | Not Available | Positive | 1782581 - 1785433 | 105745.0 |
| Trna-pseudo | Not Available | Not Available | Positive | 1785483 - 1785557 | Not Available |
| secd/secf fusion protein | SAMN04488494_1908 | Not Available | Negative | 1785613 - 1788645 | 109920.0 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04488494_1909 | Not Available | Negative | 1788760 - 1789854 | 41654.2 |
| membrane associated serine protease, rhomboid family | SAMN04488494_1910 | Not Available | Negative | 1789851 - 1790798 | 35821.4 |
| dna-binding protein hu-beta | SAMN04488494_1911 | Not Available | Positive | 1791044 - 1791316 | 9392.6 |
| gluconate 5-dehydrogenase | SAMN04488494_1912 | Not Available | Negative | 1791389 - 1792192 | 28894.9 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
