Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488494_1893 | Not Available | Negative | 1764239 - 1765489 | 47099.1 |
| protein of unknown function | SAMN04488494_1894 | Not Available | Negative | 1765507 - 1766673 | 44744.4 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488494_1895 | Not Available | Negative | 1766717 - 1769650 | 110785.0 |
| hypothetical protein | SAMN04488494_1896 | Not Available | Positive | 1769906 - 1770505 | 22720.1 |
| hypothetical protein | SAMN04488494_1897 | Not Available | Positive | 1770522 - 1770947 | 15877.7 |
| hypothetical protein | SAMN04488494_1898 | Not Available | Positive | 1771538 - 1771651 | 4233.0 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN04488494_1899 | Not Available | Positive | 1771658 - 1773595 | 71683.2 |
| beta-glucuronidase | SAMN04488494_1900 | Not Available | Positive | 1773604 - 1775418 | 69156.3 |
| beta-glucosidase | SAMN04488494_1901 | Not Available | Positive | 1775440 - 1777788 | 86943.0 |
| yd repeat-containing protein | SAMN04488494_1902 | Not Available | Positive | 1777885 - 1778304 | 16174.1 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
