Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN04488494_1883 | Not Available | Negative | 1753859 - 1755310 | 53206.1 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN04488494_1884 | Not Available | Negative | 1755334 - 1757457 | 78458.2 |
| hypothetical protein | SAMN04488494_1885 | Not Available | Negative | 1757467 - 1757904 | 16742.5 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN04488494_1886 | Not Available | Negative | 1757913 - 1758827 | 34851.6 |
| mraz protein | SAMN04488494_1887 | Not Available | Negative | 1758824 - 1759279 | 17640.4 |
| hypothetical protein | SAMN04488494_1888 | Not Available | Positive | 1759493 - 1760317 | 31431.3 |
| putative hemolysin | SAMN04488494_1889 | Not Available | Positive | 1760339 - 1761328 | 37810.6 |
| hypothetical protein | SAMN04488494_1890 | Not Available | Positive | 1761425 - 1762213 | 29012.0 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488494_1891 | Not Available | Negative | 1762203 - 1762904 | 26311.5 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN04488494_1892 | Not Available | Negative | 1762901 - 1764196 | 48859.1 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
