Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488494_1782 | Not Available | Negative | 1646029 - 1646529 | 19667.6 |
| succinate dehydrogenase / fumarate reductase cytochrome b subunit | SAMN04488494_1783 | Not Available | Positive | 1646743 - 1647432 | 25603.2 |
| succinate dehydrogenase subunit a | SAMN04488494_1784 | Not Available | Positive | 1647472 - 1649451 | 73478.5 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | SAMN04488494_1785 | Not Available | Positive | 1649457 - 1650215 | 27877.5 |
| cupin domain protein | SAMN04488494_1786 | Not Available | Negative | 1650293 - 1650763 | 17121.7 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04488494_1787 | Not Available | Negative | 1650925 - 1651350 | 15843.9 |
| dna-binding protein, histone-like, putative | SAMN04488494_1788 | Not Available | Negative | 1651914 - 1652468 | 19432.9 |
| hypothetical protein | SAMN04488494_1789 | Not Available | Negative | 1652585 - 1652764 | 6597.1 |
| virulence-associated protein e | SAMN04488494_1790 | Not Available | Negative | 1652993 - 1654384 | 52905.1 |
| hypothetical protein | SAMN04488494_1791 | Not Available | Negative | 1654529 - 1655008 | 18545.2 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
