Porphyromonas gingivalis str. KCOM 2805

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas gingivalis str. KCOM 2805 is a Gram-negative, nonsporulating rod-shaped bacterium that thrives in anaerobic conditions, with an optimal growth temperature of 37.0°C. This microbe is primarily associated with host environments, indicating a close relationship with its biological hosts, which is characteristic of many members of the genus Porphyromonas. As a strict anaerobe, P. gingivalis str. KCOM 2805 relies on environments devoid of oxygen, which is typical for bacteria residing in the oral cavity, particularly in subgingival sites where it may contribute to complex microbial communities. The specific adaptation to host-associated habitats suggests a potential role in the oral microbiome, where it may interact with other microbial species and host tissues. This strain's characteristics highlight its ecological niche within the oral environment, where it may participate in symbiotic or pathogenic interactions, depending on the context of the host's health. Understanding the traits of P. gingivalis str. KCOM 2805 can provide insights into the dynamics of microbial communities in the oral cavity and the conditions that favor the growth of anaerobic bacteria in these specialized environments. The study of such traits may also contribute to a broader understanding of microbial behavior in host-associated habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas gingivalis
StrainKCOM 2805

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Porphyromonas gingivalis str. KCOM 2805
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Canis lupus familiaris
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Porphyromonas gingivalis strain KCOM 2805 chromosome, complete

Gene Summary

Adenine Count

642555 bp

Thymine Count

642524 bp

Guanine Count

600317 bp

Cytosine Count

597521 bp

Genome Length

2482917 bp

Protein-coding Genes

2146 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxythreonine-4-phosphate dehydrogenase pdxaCS548_RS01315Not AvailableNegative297961 - 29905840112.0
duf4837 family proteinCS548_RS01320Not AvailableNegative299102 - 30015739918.0
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnCS548_RS01325Not AvailableNegative300248 - 30126137875.5
hypothetical proteinCS548_RS11800Not AvailableNegative301319 - 3014986573.91
duf1661 domain-containing proteinCS548_RS11810Not AvailablePositive301656 - 3018296562.88
histidine--trna ligaseCS548_RS01340Not AvailableNegative301936 - 30330051274.1
dihydrofolate reductaseCS548_RS01345Not AvailableNegative303361 - 30384918399.9
thymidylate synthaseCS548_RS01350Not AvailableNegative303895 - 30468930837.1
hypothetical proteinCS548_RS11815Not AvailableNegative304750 - 3048784680.84
is5 family transposaseCS548_RS01360Not AvailableNegative304903 - 30598841458.4

Displaying genes 261 – 270 of 2213 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PeriodontitisCausesPMC10258268
DysbiosisCausesPMC10258268
Periodontal diseaseCausesPMC1887533
Periodontal diseaseCausesPMC3505701
Chronic periodontitisCausesPMC3505701
Periodontal diseasesCausesPMC3617233
Chronic periodontitisCausesPMC6060398
Human pdCausesPMC10797024
PeriodontitisCausesPMC10797024
PeriodontitisCausesPMC11121222

Displaying health effects 1 – 10 of 19 in total