Porphyromonas gingivalis str. KCOM 2805

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas gingivalis str. KCOM 2805 is a Gram-negative, nonsporulating rod-shaped bacterium that thrives in anaerobic conditions, with an optimal growth temperature of 37.0°C. This microbe is primarily associated with host environments, indicating a close relationship with its biological hosts, which is characteristic of many members of the genus Porphyromonas. As a strict anaerobe, P. gingivalis str. KCOM 2805 relies on environments devoid of oxygen, which is typical for bacteria residing in the oral cavity, particularly in subgingival sites where it may contribute to complex microbial communities. The specific adaptation to host-associated habitats suggests a potential role in the oral microbiome, where it may interact with other microbial species and host tissues. This strain's characteristics highlight its ecological niche within the oral environment, where it may participate in symbiotic or pathogenic interactions, depending on the context of the host's health. Understanding the traits of P. gingivalis str. KCOM 2805 can provide insights into the dynamics of microbial communities in the oral cavity and the conditions that favor the growth of anaerobic bacteria in these specialized environments. The study of such traits may also contribute to a broader understanding of microbial behavior in host-associated habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas gingivalis
StrainKCOM 2805

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Porphyromonas gingivalis str. KCOM 2805
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Canis lupus familiaris
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Porphyromonas gingivalis strain KCOM 2805 chromosome, complete

Gene Summary

Adenine Count

642555 bp

Thymine Count

642524 bp

Guanine Count

600317 bp

Cytosine Count

597521 bp

Genome Length

2482917 bp

Protein-coding Genes

2146 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s4CS548_RS11220Not AvailablePositive2469678 - 247028322928.7
dna-directed rna polymerase subunit alphaCS548_RS11225Not AvailablePositive2470296 - 247128836800.3
50s ribosomal protein l17CS548_RS11230Not AvailablePositive2471294 - 247177618037.0
duf1661 domain-containing proteinCS548_RS11240Not AvailablePositive2472097 - 247238110901.5
duf4954 family proteinCS548_RS11245Not AvailablePositive2472613 - 247460474277.7
ump kinaseCS548_RS11250Not AvailablePositive2474687 - 247540625707.1
ribosome recycling factorCS548_RS11255Not AvailablePositive2475443 - 247600320787.1
ribosome small subunit-dependent gtpase aCS548_RS11260Not AvailablePositive2476088 - 247703534509.3
tonb-dependent receptorCS548_RS11265Not AvailablePositive2477258 - 247949583445.1
nicotinamide riboside transporter pnucCS548_RS11270Not AvailablePositive2479500 - 248010823319.9

Displaying genes 2201 – 2210 of 2213 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PeriodontitisCausesPMC10258268
DysbiosisCausesPMC10258268
Periodontal diseaseCausesPMC1887533
Periodontal diseaseCausesPMC3505701
Chronic periodontitisCausesPMC3505701
Periodontal diseasesCausesPMC3617233
Chronic periodontitisCausesPMC6060398
Human pdCausesPMC10797024
PeriodontitisCausesPMC10797024
PeriodontitisCausesPMC11121222

Displaying health effects 1 – 10 of 19 in total