Phocaeicola vulgatus

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus is a Gram-positive, anaerobic rod-shaped bacterium predominantly found in host-associated environments. This microbe typically exists as single cells rather than in clusters or chains, which is characteristic of its morphological traits. As an anaerobe, P. vulgatus thrives in environments devoid of oxygen, suggesting its adaptation to the anaerobic conditions often present in host-associated habitats, such as the gastrointestinal tract of various animals. The ability of P. vulgatus to maintain its viability and metabolic activity in low-oxygen environments highlights its potential role in the microbial communities that inhabit these niches. Its presence may be significant in the context of host-microbe interactions, contributing to the complex dynamics of gut microbiota, although specific functional roles and interactions require further investigation. Overall, P. vulgatus exemplifies the diversity of anaerobic bacteria associated with host organisms, emphasizing the intricate relationships that exist within microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinEAJ12_02470Not AvailableNegative635748 - 63749966225.7
tonb-dependent receptorEAJ12_02475Not AvailableNegative637519 - 640728118845.0
glycoside hydrolase family 97 proteinEAJ12_02480Not AvailableNegative641168 - 64309673046.7
hybrid sensor histidine kinase/response regulatorEAJ12_02485Not AvailableNegative643229 - 647455161102.0
arabinan endo-1,5-alpha-l-arabinosidaseEAJ12_02490Not AvailablePositive647743 - 64927857783.2
alpha-l-arabinofuranosidaseEAJ12_02495Not AvailablePositive649302 - 65128175354.2
arylsulfataseEAJ12_02500Not AvailableNegative652083 - 65364557696.3
trna 2-thiouridine(34) synthase mnmaEAJ12_02505Not AvailableNegative653793 - 65484840128.6
dna-binding proteinEAJ12_02510Not AvailableNegative654851 - 65532118238.8
duf4981 domain-containing proteinEAJ12_02515Not AvailableNegative655493 - 658822125978.0

Displaying genes 511 – 520 of 34247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.