Phocaeicola vulgatus

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus is a Gram-positive, anaerobic rod-shaped bacterium predominantly found in host-associated environments. This microbe typically exists as single cells rather than in clusters or chains, which is characteristic of its morphological traits. As an anaerobe, P. vulgatus thrives in environments devoid of oxygen, suggesting its adaptation to the anaerobic conditions often present in host-associated habitats, such as the gastrointestinal tract of various animals. The ability of P. vulgatus to maintain its viability and metabolic activity in low-oxygen environments highlights its potential role in the microbial communities that inhabit these niches. Its presence may be significant in the context of host-microbe interactions, contributing to the complex dynamics of gut microbiota, although specific functional roles and interactions require further investigation. Overall, P. vulgatus exemplifies the diversity of anaerobic bacteria associated with host organisms, emphasizing the intricate relationships that exist within microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alanine--trna ligaseEAJ12_01165Not AvailableNegative297603 - 30022197398.6
m23 family peptidaseEAJ12_01170Not AvailablePositive300361 - 30132936405.9
merr family transcriptional regulatorEAJ12_01175Not AvailablePositive301363 - 30171013742.9
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseEAJ12_01180Not AvailableNegative301802 - 30407286308.0
lysm peptidoglycan-binding domain-containing proteinEAJ12_01185Not AvailableNegative304174 - 30543647706.3
hypothetical proteinEAJ12_01190Not AvailableNegative305441 - 30614826895.4
parb/repb/spo0j family partition proteinEAJ12_01195Not AvailableNegative306218 - 30711433345.2
para family proteinEAJ12_01200Not AvailableNegative307118 - 30788527989.0
5'/3'-nucleotidase sureEAJ12_01205Not AvailablePositive308143 - 30891628332.7
lipid-a-disaccharide synthaseEAJ12_01210Not AvailablePositive308913 - 31005243098.5

Displaying genes 261 – 270 of 34247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.