Phocaeicola vulgatus

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus is a Gram-positive, anaerobic rod-shaped bacterium predominantly found in host-associated environments. This microbe typically exists as single cells rather than in clusters or chains, which is characteristic of its morphological traits. As an anaerobe, P. vulgatus thrives in environments devoid of oxygen, suggesting its adaptation to the anaerobic conditions often present in host-associated habitats, such as the gastrointestinal tract of various animals. The ability of P. vulgatus to maintain its viability and metabolic activity in low-oxygen environments highlights its potential role in the microbial communities that inhabit these niches. Its presence may be significant in the context of host-microbe interactions, contributing to the complex dynamics of gut microbiota, although specific functional roles and interactions require further investigation. Overall, P. vulgatus exemplifies the diversity of anaerobic bacteria associated with host organisms, emphasizing the intricate relationships that exist within microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transketolaseEAJ12_08550Not AvailablePositive2017201 - 201921372436.4
ribose 5-phosphate isomerase bEAJ12_08555Not AvailablePositive2019210 - 201964415944.1
duf4468 domain-containing proteinEAJ12_08560Not AvailablePositive2019751 - 202084840449.4
tetratricopeptide repeat proteinEAJ12_08565Not AvailablePositive2021213 - 202150911531.6
4fe-4s dicluster domain-containing proteinEAJ12_08570Not AvailablePositive2021520 - 20217508117.04
3-methyl-2-oxobutanoate dehydrogenase subunit vorbEAJ12_08575Not AvailablePositive2021762 - 202284439202.6
hypothetical proteinEAJ12_08580Not AvailablePositive2022851 - 20230186434.4
2-oxoglutarate oxidoreductaseEAJ12_08585Not AvailablePositive2023037 - 202380127912.9
2-oxoglutarate ferredoxin oxidoreductase subunit gammaEAJ12_08590Not AvailablePositive2023815 - 202435719888.6
hypothetical proteinEAJ12_08595Not AvailableNegative2024351 - 20245397558.39

Displaying genes 1661 – 1670 of 34247 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.