Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
CZAN00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | EAJ12_08550 | Not Available | Positive | 2017201 - 2019213 | 72436.4 |
| ribose 5-phosphate isomerase b | EAJ12_08555 | Not Available | Positive | 2019210 - 2019644 | 15944.1 |
| duf4468 domain-containing protein | EAJ12_08560 | Not Available | Positive | 2019751 - 2020848 | 40449.4 |
| tetratricopeptide repeat protein | EAJ12_08565 | Not Available | Positive | 2021213 - 2021509 | 11531.6 |
| 4fe-4s dicluster domain-containing protein | EAJ12_08570 | Not Available | Positive | 2021520 - 2021750 | 8117.04 |
| 3-methyl-2-oxobutanoate dehydrogenase subunit vorb | EAJ12_08575 | Not Available | Positive | 2021762 - 2022844 | 39202.6 |
| hypothetical protein | EAJ12_08580 | Not Available | Positive | 2022851 - 2023018 | 6434.4 |
| 2-oxoglutarate oxidoreductase | EAJ12_08585 | Not Available | Positive | 2023037 - 2023801 | 27912.9 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | EAJ12_08590 | Not Available | Positive | 2023815 - 2024357 | 19888.6 |
| hypothetical protein | EAJ12_08595 | Not Available | Negative | 2024351 - 2024539 | 7558.39 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

