Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 65, n-terminal domain | CK234_00005 | Not Available | Positive | 6837 - 9281 | 92039.8 |
| putative unsaturated rhamnogalacturonyl hydrolase, yter-like | CK234_00006 | Not Available | Positive | 9330 - 10529 | 45445.2 |
| protein of unknown function (duf4038) | CK234_00007 | Not Available | Positive | 10680 - 12149 | 56349.4 |
| sialidase b precursor | CK234_00008 | Not Available | Positive | 12164 - 16129 | 149425.0 |
| non-reducing end beta-l-arabinofuranosidase | CK234_00009 | Not Available | Positive | 16357 - 18462 | 78760.8 |
| right handed beta helix region | CK234_00010 | Not Available | Positive | 18487 - 20310 | 68636.1 |
| bacterial alpha-l-rhamnosidase 6 hairpin glycosidase domain protein | CK234_00011 | Not Available | Positive | 20325 - 22469 | 81997.7 |
| hypothetical protein | CK234_00012 | Not Available | Negative | 22632 - 23060 | 16940.2 |
| putative mannose-1-phosphate guanylyltransferase, rfbm-like | CK234_00013 | Not Available | Negative | 23064 - 24107 | 39429.5 |
| gdp-l-fucose synthase | CK234_00014 | Not Available | Negative | 24122 - 25204 | 41078.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

