Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_00956 | Not Available | Negative | 1270422 - 1270622 | 6691.77 |
| long-chain-fatty-acid--coa ligase | CK234_00957 | Not Available | Negative | 1270783 - 1272456 | 63271.5 |
| putative threonylcarbamoyladenosine trna methylthiotransferase, mtab-like | CK234_00958 | Not Available | Positive | 1272562 - 1273878 | 49152.8 |
| putative rhamnosyltransferase, wbbl-like | CK234_00959 | Not Available | Positive | 1273914 - 1274939 | 39378.6 |
| radical sam superfamily protein | CK234_00960 | Not Available | Positive | 1275027 - 1275908 | 33132.9 |
| dihydroneopterin aldolase | CK234_00961 | Not Available | Negative | 1276055 - 1276423 | 13945.8 |
| asma-like c-terminal region | CK234_00962 | Not Available | Positive | 1276585 - 1279557 | 110703.0 |
| putative ribonucleoside-diphosphate reductase, nrdz-like | CK234_00963 | Not Available | Negative | 1279650 - 1282196 | 96377.3 |
| hypothetical protein | CK234_00964 | Not Available | Negative | 1282257 - 1282475 | 8589.67 |
| fmn reductase (nad(p)h) | CK234_00965 | Not Available | Positive | 1282540 - 1283280 | 28440.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

