Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-independent coproporphyrinogen-iii oxidase 1 | CK234_00946 | Not Available | Negative | 1261350 - 1262480 | 43549.6 |
| elongation factor g | CK234_00947 | Not Available | Positive | 1262717 - 1264876 | 80535.6 |
| putative alkaline phosphatase synthesis sensor protein, phor-like | CK234_00948 | Not Available | Positive | 1265109 - 1266707 | 60832.8 |
| putative response regulator, mpra-like | CK234_00949 | Not Available | Positive | 1266709 - 1267407 | 26811.6 |
| hypothetical protein | CK234_00950 | Not Available | Negative | 1267483 - 1267665 | 6168.02 |
| organic hydroperoxide resistance transcriptional regulator | CK234_00951 | Not Available | Negative | 1267774 - 1268220 | 17228.0 |
| 30s ribosomal protein s6 | CK234_00952 | Not Available | Positive | 1268430 - 1268774 | 13428.3 |
| 30s ribosomal protein s18 | CK234_00953 | Not Available | Positive | 1268777 - 1269046 | 10561.2 |
| 50s ribosomal protein l9 | CK234_00954 | Not Available | Positive | 1269062 - 1269505 | 16159.9 |
| hypothetical protein | CK234_00955 | Not Available | Negative | 1269575 - 1270267 | 26978.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

