Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna internalization-related competence protein comec/rec2 | CK234_00926 | Not Available | Positive | 1225756 - 1227675 | 72551.4 |
| putative bifunctional oligoribonuclease and pap phosphatase, nrna-like | CK234_00927 | Not Available | Positive | 1227725 - 1228765 | 39348.3 |
| protein of unknown function (duf4827) | CK234_00928 | Not Available | Positive | 1228848 - 1229507 | 25088.7 |
| phosphomannomutase/phosphoglucomutase | CK234_00929 | Not Available | Positive | 1229494 - 1230882 | 50477.7 |
| beta-glucanase precursor | CK234_00930 | Not Available | Positive | 1230973 - 1231764 | 30541.4 |
| putative inner membrane symporter, yicj-like | CK234_00931 | Not Available | Positive | 1232047 - 1233585 | 56265.9 |
| transposase is116/is110/is902 family protein | CK234_00932 | Not Available | Negative | 1233756 - 1234721 | 35543.4 |
| endo-1,4-beta-xylanase a precursor | CK234_00933 | Not Available | Positive | 1234934 - 1236055 | 41996.4 |
| xylosidase/arabinosidase | CK234_00934 | Not Available | Positive | 1236068 - 1237039 | 36891.2 |
| beta-xylosidase | CK234_00935 | Not Available | Positive | 1237302 - 1239125 | 68385.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

