Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type i secretion outer membrane protein, tolc family-like | CK234_00916 | Not Available | Positive | 1212673 - 1214160 | 56925.7 |
| putative multidrug export protein, acrf-like | CK234_00917 | Not Available | Positive | 1214157 - 1217333 | 121126.0 |
| n-acetylglucosamine-6-phosphate deacetylase | CK234_00918 | Not Available | Positive | 1217423 - 1218586 | 42248.9 |
| threonylcarbamoyl-amp synthase | CK234_00919 | Not Available | Positive | 1218753 - 1219328 | 21163.3 |
| putative h(+)/cl(-) exchange transporter, clca-like | CK234_00920 | Not Available | Positive | 1219337 - 1221139 | 66932.9 |
| methionyl-trna formyltransferase | CK234_00921 | Not Available | Positive | 1221153 - 1222127 | 36638.5 |
| nigd-like c-terminal beta sandwich domain protein | CK234_00922 | Not Available | Negative | 1222200 - 1222982 | 29095.8 |
| putative rna polymerase sigma factor, sigm-like | CK234_00923 | Not Available | Positive | 1223140 - 1223682 | 20885.1 |
| hypothetical protein | CK234_00924 | Not Available | Positive | 1224663 - 1224980 | 11305.4 |
| ribulose-phosphate 3-epimerase | CK234_00925 | Not Available | Positive | 1225056 - 1225709 | 23913.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

