Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf1573) | CK234_00906 | Not Available | Positive | 1200527 - 1201393 | 33023.6 |
| nveala protein | CK234_00907 | Not Available | Positive | 1201635 - 1201859 | 8038.65 |
| 6-bladed beta-propeller | CK234_00908 | Not Available | Positive | 1202019 - 1203017 | 37596.0 |
| nveala protein | CK234_00909 | Not Available | Positive | 1203044 - 1203262 | 8103.61 |
| signal peptidase i | CK234_00910 | Not Available | Positive | 1204103 - 1204858 | 29273.2 |
| hypothetical protein | CK234_00911 | Not Available | Positive | 1204873 - 1206780 | 73819.5 |
| o-antigen ligase | CK234_00912 | Not Available | Positive | 1206783 - 1208432 | 62038.3 |
| rnd family efflux transporter, mfp subunit | CK234_00913 | Not Available | Positive | 1208485 - 1209552 | 39187.2 |
| putative multidrug resistance protein, mdtc-like | CK234_00914 | Not Available | Positive | 1209557 - 1212070 | 92860.2 |
| putative multidrug resistance protein, mdtc-like | CK234_00915 | Not Available | Positive | 1212072 - 1212686 | 23053.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

