Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| the resistance to homoserine/threonine (rhtb) family protein | CK234_00896 | Not Available | Positive | 1190571 - 1191230 | 24319.7 |
| protein of unknown function (duf4924) | CK234_00897 | Not Available | Positive | 1191302 - 1191844 | 21312.0 |
| dtdp-4-dehydrorhamnose reductase | CK234_00898 | Not Available | Positive | 1191859 - 1192716 | 32010.2 |
| peptide chain release factor 3 | CK234_00899 | Not Available | Positive | 1192723 - 1194291 | 59968.5 |
| putative dnaj-like protein, djla-like | CK234_00900 | Not Available | Negative | 1194366 - 1195148 | 29022.9 |
| putative 2-hydroxyacid dehydrogenase | CK234_00901 | Not Available | Positive | 1195255 - 1196139 | 32586.1 |
| l-aspartate dehydrogenase | CK234_00902 | Not Available | Negative | 1196122 - 1196910 | 28134.8 |
| tolb-like 6-blade propeller-like protein | CK234_00903 | Not Available | Positive | 1197207 - 1198286 | 40392.0 |
| putative phosphate regulon transcriptional regulatory protein, phob-like | CK234_00904 | Not Available | Negative | 1199050 - 1200048 | 38414.6 |
| nveala protein | CK234_00905 | Not Available | Positive | 1200302 - 1200523 | 7878.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

