Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_00886 | Not Available | Positive | 1172350 - 1172571 | 8766.94 |
| hypothetical protein | CK234_00887 | Not Available | Positive | 1172590 - 1173081 | 17873.6 |
| beta-hexosaminidase | Not Available | Not Available | Negative | 1173191 - 1175497 | 85868.1 |
| endonuclease/exonuclease/phosphatase family protein | CK234_00889 | Not Available | Negative | 1175554 - 1176585 | 39595.6 |
| uvra-like protein | CK234_00890 | Not Available | Negative | 1176831 - 1179632 | 104874.0 |
| glycosyl hydrolase-like 10 | CK234_00891 | Not Available | Positive | 1179714 - 1181213 | 58071.4 |
| putative chromate transport protein | CK234_00892 | Not Available | Negative | 1181500 - 1182072 | 21054.4 |
| chromate transport protein | CK234_00893 | Not Available | Negative | 1182069 - 1182617 | 20451.8 |
| putative sensor histidine kinase, tods-like | CK234_00894 | Not Available | Negative | 1182622 - 1186638 | 154471.0 |
| phosphoribosylformylglycinamidine synthase | CK234_00895 | Not Available | Negative | 1186716 - 1190420 | 137200.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

