Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-acylglucosamine n-acyltransferase | CK234_00876 | Not Available | Negative | 1160141 - 1161181 | 36895.4 |
| hd domain protein | CK234_00877 | Not Available | Negative | 1161314 - 1162549 | 47185.1 |
| orotidine 5'-phosphate decarboxylase, subfamily 2 | CK234_00878 | Not Available | Negative | 1162638 - 1163456 | 30601.6 |
| peptide chain release factor 1 | CK234_00879 | Not Available | Negative | 1163493 - 1164608 | 42032.6 |
| phosphoribosylformylglycinamidine cyclo-ligase | CK234_00880 | Not Available | Negative | 1164851 - 1166020 | 42663.2 |
| hypothetical protein | CK234_00881 | Not Available | Positive | 1167232 - 1167825 | 22604.9 |
| virulence protein rhum family protein | CK234_00882 | Not Available | Positive | 1167828 - 1168826 | 39570.0 |
| hypothetical protein | CK234_00883 | Not Available | Negative | 1168794 - 1169009 | 7928.93 |
| glycosyl hydrolase-like 10 | CK234_00884 | Not Available | Negative | 1169175 - 1170854 | 64157.6 |
| carbon starvation protein a | CK234_00885 | Not Available | Positive | 1170933 - 1172363 | 52213.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

