Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | CK234_00866 | Not Available | Positive | 1146684 - 1148570 | 70580.9 |
| putative pep-cterm system tpr-repeat lipoprotein | CK234_00867 | Not Available | Positive | 1148581 - 1149924 | 51729.6 |
| putative thiol-disulfide oxidoreductase, resa-like | CK234_00868 | Not Available | Positive | 1149955 - 1151145 | 44887.8 |
| thioredoxin | CK234_00869 | Not Available | Positive | 1151167 - 1153275 | 80305.8 |
| hypothetical protein | CK234_00870 | Not Available | Positive | 1153387 - 1154160 | 29786.4 |
| alpha-l-fucosidase | CK234_00871 | Not Available | Negative | 1154338 - 1156377 | 76768.4 |
| trna dimethylallyltransferase | CK234_00872 | Not Available | Negative | 1156386 - 1157288 | 35088.3 |
| plasmid pria4b orf-3-like protein | CK234_00873 | Not Available | Negative | 1157340 - 1157903 | 21611.7 |
| acyl-(acyl-carrier-protein)--udp-n- acetylglucosamine o-acyltransferase | CK234_00874 | Not Available | Negative | 1157966 - 1158733 | 27740.6 |
| udp-3-o-(3-hydroxymyristoyl) n-acetylglucosamine deacetylase | CK234_00875 | Not Available | Negative | 1158750 - 1160135 | 51127.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

