Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrienterobactin receptor precursor | CK234_00055 | Not Available | Positive | 75364 - 78438 | 113198.0 |
| susd family protein | CK234_00056 | Not Available | Positive | 78464 - 79963 | 55427.2 |
| beta-galactosidase | CK234_00057 | Not Available | Positive | 80093 - 83263 | 121131.0 |
| beta-galactosidase | CK234_00058 | Not Available | Positive | 83354 - 86194 | 106211.0 |
| alpha-l-rhamnosidase | CK234_00059 | Not Available | Positive | 86342 - 89572 | 121396.0 |
| carbohydrate esterase, sialic acid-specific acetylesterase | CK234_00060 | Not Available | Positive | 89590 - 91014 | 53405.0 |
| hypothetical protein | CK234_00061 | Not Available | Positive | 91027 - 93258 | 85680.7 |
| choloylglycine hydrolase | CK234_00062 | Not Available | Positive | 93478 - 94551 | 39432.2 |
| Trna-lys | Not Available | Not Available | Positive | 94723 - 94798 | Not Available |
| putative magnesium transport protein, cora-like | CK234_00064 | Not Available | Positive | 95256 - 96296 | 40193.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

