Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tyrosine recombinase, xerc-like | CK234_00856 | Not Available | Negative | 1137403 - 1138563 | 44986.7 |
| aspartate aminotransferase | CK234_00857 | Not Available | Negative | 1139336 - 1140529 | 43014.4 |
| ribba-like riboflavin biosynthesis protein | CK234_00858 | Not Available | Negative | 1140654 - 1141868 | 44935.4 |
| putative permease yjgp/yjgq family protein | CK234_00859 | Not Available | Negative | 1141871 - 1143721 | 70596.9 |
| hypothetical protein | CK234_00860 | Not Available | Negative | 1143853 - 1144239 | 15298.1 |
| Trna-met | Not Available | Not Available | Positive | 1144443 - 1144519 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1144578 - 1144651 | Not Available |
| hypothetical protein | CK234_00863 | Not Available | Negative | 1145188 - 1145460 | 9528.23 |
| hypothetical protein | CK234_00864 | Not Available | Positive | 1145790 - 1146077 | 10666.1 |
| putative methicillin resistance regulatory protein, meci-like | CK234_00865 | Not Available | Positive | 1146267 - 1146650 | 14896.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

