Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna small subunit methyltransferase i | CK234_00846 | Not Available | Positive | 1118987 - 1119715 | 26981.7 |
| chromosome segregation protein smc, primarily archaeal type | CK234_00847 | Not Available | Positive | 1119744 - 1120592 | 31533.4 |
| putative had-hydrolase, yfnb-like | CK234_00848 | Not Available | Positive | 1120668 - 1121357 | 26954.8 |
| susd family protein | CK234_00849 | Not Available | Negative | 1121508 - 1122983 | 54874.2 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00850 | Not Available | Negative | 1123012 - 1125849 | 105721.0 |
| starch-binding associating with outer membrane | CK234_00851 | Not Available | Negative | 1126033 - 1127529 | 56804.6 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00852 | Not Available | Negative | 1127542 - 1130370 | 104694.0 |
| hypothetical protein | CK234_00853 | Not Available | Negative | 1131473 - 1132261 | 28499.5 |
| starch-binding associating with outer membrane | CK234_00854 | Not Available | Negative | 1132286 - 1133827 | 57184.2 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00855 | Not Available | Negative | 1133852 - 1136812 | 109863.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

