Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stage v sporulation protein d | CK234_00836 | Not Available | Positive | 1106720 - 1108570 | 69195.5 |
| putative rod shape-determining protein, roda-like | CK234_00837 | Not Available | Positive | 1108551 - 1110005 | 54300.7 |
| putative gliding motility-associated lipoprotein, gldh-like | CK234_00838 | Not Available | Negative | 1110009 - 1110506 | 18762.5 |
| psp1 c-terminal conserved region | CK234_00839 | Not Available | Negative | 1110469 - 1111983 | 57743.0 |
| dna polymerase iii subunit delta' | CK234_00840 | Not Available | Negative | 1112073 - 1113197 | 43533.9 |
| 5,10-methylenetetrahydrofolate reductase | CK234_00841 | Not Available | Negative | 1113225 - 1114178 | 36211.4 |
| cardiolipin synthase | CK234_00842 | Not Available | Negative | 1114534 - 1115829 | 49744.2 |
| Trna-lys | Not Available | Not Available | Positive | 1116923 - 1116998 | Not Available |
| putative sporulation integral membrane protein, ytvi-like | CK234_00844 | Not Available | Negative | 1117090 - 1118226 | 42807.2 |
| thymidine kinase | CK234_00845 | Not Available | Negative | 1118237 - 1118764 | 19572.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

