Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative rhamnogalacturonan acetylesterase, rhgt-like | CK234_00826 | Not Available | Positive | 1088990 - 1090714 | 63984.5 |
| putative sensor histidine kinase, tmos-like | CK234_00827 | Not Available | Positive | 1090910 - 1095310 | 169197.0 |
| outer membrane protein beta-barrel domain protein | CK234_00828 | Not Available | Positive | 1095505 - 1096239 | 27039.4 |
| prolyl tripeptidyl peptidase precursor | CK234_00829 | Not Available | Positive | 1096349 - 1098790 | 94292.0 |
| n-acetylhexosamine 1-kinase | CK234_00830 | Not Available | Negative | 1098876 - 1099958 | 41591.0 |
| phosphate transporter family protein | CK234_00831 | Not Available | Negative | 1100066 - 1102309 | 83466.1 |
| putative bifunctional purine biosynthesis protein, purh-like | CK234_00832 | Not Available | Positive | 1102599 - 1104122 | 56222.2 |
| putative rod shape-determining protein, mreb-like | CK234_00833 | Not Available | Positive | 1104235 - 1105257 | 36937.0 |
| putative cell shape-determining protein, mrec precursor-like | CK234_00834 | Not Available | Positive | 1105363 - 1106211 | 31395.4 |
| putative rod shape-determining protein, mred-like | CK234_00835 | Not Available | Positive | 1106220 - 1106720 | 18956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

