Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr protein | CK234_00816 | Not Available | Positive | 1068519 - 1069451 | 35880.6 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00817 | Not Available | Positive | 1069507 - 1072806 | 122190.0 |
| susd family protein | CK234_00818 | Not Available | Positive | 1072825 - 1074513 | 64111.6 |
| beta-galactosidase | CK234_00819 | Not Available | Positive | 1074599 - 1077628 | 114401.0 |
| beta-galactosidase | CK234_00820 | Not Available | Positive | 1077631 - 1080999 | 126868.0 |
| alpha-xylosidase | CK234_00821 | Not Available | Positive | 1081013 - 1083397 | 91754.6 |
| acetyl xylan esterase (axe1) | CK234_00822 | Not Available | Positive | 1083415 - 1085415 | 74937.3 |
| cupin domain protein | CK234_00823 | Not Available | Negative | 1085509 - 1086000 | 18182.0 |
| pectate lyase, pela/pel-15e family | CK234_00824 | Not Available | Positive | 1086189 - 1087802 | 61375.3 |
| abhydrolase family protein | CK234_00825 | Not Available | Positive | 1087823 - 1088983 | 43510.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

