Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna-binding protein, histone-like | CK234_00786 | Not Available | Negative | 1012601 - 1013281 | 25970.1 |
| protein of unknown function (duf3874) | CK234_00787 | Not Available | Positive | 1013609 - 1015006 | 53005.0 |
| rna polymerase sigma-70 factor | CK234_00788 | Not Available | Positive | 1015495 - 1016082 | 22864.5 |
| protein of unknown function (duf4974) | CK234_00789 | Not Available | Positive | 1016201 - 1017145 | 35686.1 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00790 | Not Available | Positive | 1017300 - 1020680 | 125671.0 |
| susd family protein | CK234_00791 | Not Available | Positive | 1020693 - 1022174 | 56715.9 |
| beta-galactosidase | CK234_00792 | Not Available | Positive | 1022198 - 1025077 | 108956.0 |
| alpha-l-rhamnosidase | CK234_00793 | Not Available | Positive | 1025108 - 1028317 | 121190.0 |
| exo-poly-alpha-d-galacturonosidase precursor | CK234_00794 | Not Available | Positive | 1028325 - 1029659 | 50298.4 |
| glycosyl hydrolase family 115 | CK234_00795 | Not Available | Positive | 1029767 - 1032112 | 90290.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

