Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit h | CK234_00766 | Not Available | Negative | 983072 - 984148 | 40265.7 |
| nadh-quinone oxidoreductase subunit c/d | CK234_00767 | Not Available | Negative | 984272 - 985831 | 59743.6 |
| nadh-quinone oxidoreductase subunit 6 | CK234_00768 | Not Available | Negative | 985828 - 986424 | 22081.9 |
| nad(p)h-quinone oxidoreductase subunit 3 | CK234_00769 | Not Available | Negative | 986415 - 986765 | 13099.5 |
| hypothetical protein | CK234_00770 | Not Available | Negative | 986869 - 987246 | 14644.8 |
| trkg-like potassium uptake protein | CK234_00771 | Not Available | Negative | 987349 - 988803 | 53448.3 |
| trka-like potassium uptake protein | CK234_00772 | Not Available | Negative | 988803 - 990143 | 49321.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | CK234_00773 | Not Available | Negative | 990156 - 992090 | 71678.8 |
| gscfa family protein | CK234_00774 | Not Available | Positive | 992147 - 993133 | 38669.6 |
| alanine racemase | CK234_00775 | Not Available | Positive | 993109 - 995574 | 92830.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

