Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf3868) | CK234_00045 | Not Available | Negative | 57613 - 58707 | 40170.9 |
| protein of unknown function (duf3575) | CK234_00046 | Not Available | Negative | 58736 - 59302 | 21301.5 |
| putative tyrosine recombinase, xerd-like | CK234_00047 | Not Available | Negative | 59649 - 60578 | 35843.5 |
| hypothetical protein | CK234_00048 | Not Available | Positive | 60774 - 63479 | 101897.0 |
| putative addiction module killer protein | CK234_00049 | Not Available | Positive | 63625 - 63966 | 13792.8 |
| y4mf family transcriptional regulator | CK234_00050 | Not Available | Positive | 63938 - 64240 | 11061.2 |
| beta-galactosidase | CK234_00051 | Not Available | Positive | 64329 - 68609 | 162291.0 |
| aspartate/alanine antiporter | CK234_00052 | Not Available | Positive | 68700 - 70298 | 56662.7 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00053 | Not Available | Positive | 70566 - 73685 | 115491.0 |
| susd family protein | CK234_00054 | Not Available | Positive | 73707 - 75152 | 54470.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

