Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| intracellular endo-alpha-(1->5)-l-arabinanase | CK234_00726 | Not Available | Positive | 936151 - 938010 | 69237.6 |
| cysteine--trna ligase | CK234_00727 | Not Available | Positive | 938385 - 939866 | 56272.0 |
| tyrosine 2,3-aminomutase | CK234_00728 | Not Available | Positive | 940054 - 941625 | 59097.5 |
| putative 3-oxoacyl-(acyl-carrier-protein) reductase, fabg-like | CK234_00729 | Not Available | Positive | 941622 - 942350 | 26411.8 |
| 3-oxoacyl-(acyl-carrier-protein) synthase 1 | CK234_00730 | Not Available | Positive | 942358 - 943587 | 44242.6 |
| acyl carrier protein | CK234_00731 | Not Available | Positive | 943609 - 943860 | 9584.45 |
| lipid a biosynthesis lauroyl (or palmitoleoyl) acyltransferase | CK234_00732 | Not Available | Positive | 943860 - 944744 | 34490.0 |
| demethylspheroidene o-methyltransferase | CK234_00733 | Not Available | Positive | 944758 - 945828 | 40576.6 |
| (3r)-hydroxymyristoyl-acp dehydratase | CK234_00734 | Not Available | Positive | 945825 - 946262 | 16452.2 |
| acyl-coa thioester hydrolase, ybgc/ybaw family | CK234_00735 | Not Available | Positive | 946259 - 946702 | 17306.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

