Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative trna-specific 2-thiouridylase, mnma-like | CK234_00716 | Not Available | Positive | 915185 - 916201 | 38684.9 |
| arylsulfatase precursor | CK234_00717 | Not Available | Positive | 916349 - 916834 | 17366.6 |
| choline-sulfatase | CK234_00718 | Not Available | Positive | 916806 - 917912 | 41495.2 |
| extracellular exo-alpha-l-arabinofuranosidase precursor | CK234_00719 | Not Available | Negative | 918714 - 920693 | 75354.2 |
| extracellular endo-alpha-(1->5)-l-arabinanase precursor | CK234_00720 | Not Available | Negative | 920717 - 922252 | 57814.3 |
| putative sensor histidine kinase, tmos-like | CK234_00721 | Not Available | Positive | 922540 - 926769 | 161436.0 |
| retaining alpha-galactosidase precursor | CK234_00722 | Not Available | Positive | 926902 - 928830 | 72947.5 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00723 | Not Available | Positive | 929270 - 932479 | 118845.0 |
| susd family protein | CK234_00724 | Not Available | Positive | 932499 - 934250 | 66225.7 |
| bacterial ig-like domain (group 3) | CK234_00725 | Not Available | Positive | 934275 - 936053 | 64373.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

