Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative epimerase/dehydratase | CK234_00706 | Not Available | Positive | 900252 - 901205 | 35269.3 |
| 2-dehydro-3-deoxygluconokinase | CK234_00707 | Not Available | Positive | 901353 - 902417 | 38944.4 |
| putative protein-export membrane protein, secd-like | CK234_00708 | Not Available | Negative | 902682 - 905669 | 109218.0 |
| dcp-like peptidyl-dipeptidase | CK234_00709 | Not Available | Negative | 905848 - 907935 | 78974.4 |
| exodeoxyribonuclease iii (xth) | CK234_00710 | Not Available | Negative | 907962 - 909041 | 40377.0 |
| rhomboid family protein | CK234_00711 | Not Available | Negative | 909045 - 909938 | 33946.6 |
| putative rhomboid protease, aara-like | CK234_00712 | Not Available | Negative | 909919 - 910596 | 25331.5 |
| hu-like dna-binding protein | CK234_00713 | Not Available | Positive | 910807 - 911079 | 9278.25 |
| evolved beta-galactosidase subunit alpha | CK234_00714 | Not Available | Positive | 911160 - 914501 | 126477.0 |
| virulence protein rhum family protein | CK234_00715 | Not Available | Positive | 914673 - 915143 | 18252.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

